David
Fairen-Jimenez‡
*a,
Raimondas
Galvelis
b,
Antonio
Torrisi
b,
Alistair D.
Gellan
a,
Michael T.
Wharmby
c,
Paul A.
Wright
c,
Caroline
Mellot-Draznieks
b and
Tina
Düren
a
aInstitute for Materials and Processes, School of Engineering, The University of Edinburgh, United Kingdom. E-mail: David.Fairen-Jimenez@Northwestern.edu
bDepartment of Chemistry, University College London, United Kingdom
cEaStCHEM School of Chemistry, University of St. Andrews, United Kingdom
First published on 27th June 2012
ZIF-8, a prototypical zeolitic porous coordination polymer, prepared via the self-assembly of tetrahedral atoms (e.g. Zn and Co) and organic imidazolate linkers, presents large cavities which are interconnected by narrow windows that allow, in principle, molecular sieving. However, ZIF-8 shows flexibility due to the swing of the imidazolate linkers, which results in the adsorption of molecules which are too large to fit through the narrow window. In this work, we assess the impact of this flexibility, previously only observed for nitrogen, and the level of agreement between the experimental and simulated isotherms of different energy-related gases on ZIF-8 (CO2, CH4 and alkanes). We combine experimental gas adsorption with GCMC simulations, using generic and adjusted force fields and DFT calculations with the Grimme dispersion correction. By solely adapting the UFF force field to reduce the Lennard-Jones parameter ε, we achieve excellent agreement between the simulated and experimental results not only for ZIF-8 but also for ZIF-20, where the transferability of the adapted force field is successfully tested. Regarding ZIF-8, we show that two different structural configurations are needed to properly describe the adsorption performance of this material, demonstrating that ZIF-8 is undergoing a structural change during gas adsorption. DFT calculations with the Grimme dispersion correction are consistent with the GCMC and experimental observations, illustrating the thermodynamics of the CH4 adsorption sites and confirming the existence of a new adsorption site with a high binding energy within the 4-ring window of ZIF-8.
The adsorption of energy-related gases is of great importance in many industrial and automotive applications. This includes, for example, the storage of natural gas, which mainly consists of CH4, as an attractive alternative to petroleum-based fuels. Moreover, alkane purification and CO2 separation using porous materials are key processes in the petrochemical industry and in carbon capture and sequestration (CCS) technologies.
Grand canonical Monte Carlo (GCMC) simulation is a powerful technique that allows us to quantitatively predict the uptake of fluids and to screen existing or hypothetical MOF structures for specific applications. For the proposed applications, the prerequisite to precisely predict the adsorption behavior of a fluid in a porous material is the accurate description of the interaction between the fluid and the solid. Adsorption in ZIFs has been widely studied by molecular simulation with a particular focus on ZIFs with the gmelinite (GME) topology, such as ZIF-68 and ZIF-69,5–7 but also in many other structures.8–11 In most of these studies, where generic force fields such as UFF12 and Dreiding13 were used, the simulated amount adsorbed was significantly overpredicted without significant differences between force fields.14,15 However, Pérez-Pellitero et al. reported a notable improvement when the force field parameters (i.e. σ and ε of the Lennard-Jones potential) were adjusted to reproduce the experimental isotherms.16 On the other hand, a recent study by Babarao et al. revealed that when pore accessibility for ZIF-68 and ZIF-69 was correctly taken into account by partial pore blocking, simulations with generic force fields, such as UFF without adjusting the potential parameters, were able to match the experimental results.15
In this work, we focus on the study of ZIF-8 as a prototypical structure with sodalite (SOD) topology. ZIF-8 is comprised of large cavities (∼11.7 Å of diameter) interconnected by narrow windows (∼3.40 Å). Therefore, in the absence of structural defects and in contrast to ZIF-68 and ZIF-69, the whole porosity of the framework will be either accessible to gas molecules or not, depending on the relation between the kinetic diameter of the gas molecule and the 3.40 Å window size of ZIF-8. However, it has been experimentally observed that molecules which are theoretically too large to pass through the windows of the ZIF framework, such as CH4 and N2, are adsorbed into the material.1,17 In a previous paper, we observed using in situ XRD the existence of a structural change in ZIF-8 during the adsorption of N2 at 77 K, caused by a swing of the imidazolate linkers.18 In this case, the step in the N2 adsorption isotherm for ZIF-8 was caused by a structural change, which was also responsible for the unexpected adsorption of large molecules in ZIF-8 due to the enlargement of the window size. Thus, a correct description of the flexibility using two different structural configurations (i.e. ZIF-8AP obtained for the empty structure at ambient pressure and ZIF-8HP obtained at high N2 uptake), is essential to precisely describe the adsorption performance using GCMC simulations. More recently, Ania et al. combined gas adsorption experiments and GCMC simulations to study the structural change of ZIF-8 during the adsorption of N2, O2, Ar and CO at cryogenic temperatures, where their isotherms showed pronounced steps during the adsorption processes.19 However, it is unclear if this phenomenon also arises for other gases where no steps exist in the adsorption isotherms and if it is also extended to ambient, and therefore industrially applicable, temperatures. In the present paper, we assess the importance of the framework flexibility and the use of different generic force fields in ZIF-8 for the prediction of the energy-related gases methane, ethane, propane, butane and CO2 at cryogenic and ambient temperatures. First, we adjust the generic force fields commonly used for the molecular simulation of adsorption in MOFs to correctly describe the solid–fluid interaction for CH4, taking into account the influence of the flexibility on ZIF-8 during the adsorption process. Then, we study the transferability of the proposed force fields by comparing the simulated isotherms of different alkanes and CO2 to the experimental isotherms of ZIF-8 and methane in ZIF-20.20 Finally, we complement our results with dispersion-corrected DFT-D calculations to provide further insights into the different adsorption sites in the two different ZIF-8 structural configurations.
ZIF-8 is formed via the self-assembly of Zn and 2-methylimidazolate linkers (MeIM), giving rise to four- and six-ring ZnN4 clusters. In ZIF-8, the small windows (4-ring) are closed whereas the larger ones (6-ring), where the three –CH3 groups from the MeIM are pointing, remain open giving access to the pore cavities. Fig. 1 represents the two structural configurations, ZIF-8AP and ZIF-8HP, found for this material during N2 adsorption.18 The geometrical pore size distribution (PSD) of the structure was calculated with the method developed by Gelb and Gubbins which determines the diameter of the largest sphere that can fit into the cavities without overlapping with any of the framework atoms.21 Fig. S1† in the ESI shows a single peak with a pore diameter of 10.7 Å related to the single cavities that shape the structure.
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Fig. 1 (left) ZIF-8 structural configurations obtained from the PXRD data; (center) accessible surface area = red-silver and (right) contour maps of the potential energy between a CH4 molecule and ZIF-8 for (top) ZIF-8AP and (bottom) ZIF-8HP. Note the difference in the pore window size in the center and the accessible surface area. |
UFF | UFF(*) | UFF(+) | ||||
---|---|---|---|---|---|---|
σ (Å) | ε (K) | σ (Å) | ε (K) | σ (Å) | ε (K) | |
C | 3.431 | 52.838 | 3.063 | 33.288 | 3.431 | 31.270 |
N | 3.261 | 34.722 | 2.911 | 21.875 | 3.261 | 20.549 |
H | 2.571 | 22.142 | 2.296 | 13.949 | 2.571 | 13.103 |
Zn | 2.462 | 62.399 | 2.198 | 39.312 | 2.462 | 36.928 |
After equilibration, density distributions were obtained by storing the center of mass positions of all the adsorbed molecules at regular intervals during the simulation. These density distributions provide valuable information about the preferential adsorption sites and the local spatial disorder of the adsorbed molecules.
In order to compare the simulation results with the experimental data, we calculated the Henry's constant for all the adsorption isotherms studied here. Furthermore, we determined the isosteric heat of adsorption, Qst, for methane and CO2 using the Clausius–Clapeyron equation (1), which is directly related to the potential energy and the interaction energy:
![]() | (1) |
The DFT calculations were performed using the CP2K/Quickstep code.35 The restricted Kohn–Sham formalism with PBE exchange–correlation functional36 was used with the semi-empirical dispersion correction by Grimme.37 The electronic energy was minimised with the orbital transformation (OT) method.38 The convergence criterion for the self-consistent field (SCF) procedure was set to 1.0 × 10−7. The nuclear and core electronic densities were modelled with Goedecker–Teter–Hutter (GTH) pseudo-potentials39,40 and the valence electronic density represented by the hybrid Gaussian and plane-wave (GPW)41 basis sets scheme. All atoms had the split-valence double-ζ (MOLOPT-DZVP)42 basis sets. The plane wave cut-off was set to 400 Ry. Periodic boundary conditions and Γ-point only sampling was used. Structure optimizations were done in the P1 space group.
In order to understand the thermodynamics of the adsorption of CH4 in ZIF-8, DFT calculations of the binding energy have been performed. The binding energy (BE) of one CH4 molecule per unit-cell of ZIF-8 was evaluated as given in eqn (2):
BE = Eoptim(CH4 + ZIF-8) − (Eoptim(ZIF-8) + Eoptim(CH4)) | (2) |
ZIF-8HP is unstable without a sufficient number of guest CH4 molecules inside, so the binding energy cannot be calculated using eqn (2). In order to characterize CH4 in ZIF-8HP, a constrained optimization has been performed by fixing the carbon atom of CH4 in the middle of the 4-ring window. This provides an estimate of the penalty energy for the insertion of one CH4 molecule into the 4-ring window upon the swing effect of the imidazolate linkers. The penalty energy (PE) was evaluated as given in eqn (3):
PE = Econstr(CH4 + ZIF-8) − (Eoptim(ZIF-8) + Eoptim(CH4)), | (3) |
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Fig. 2 Adsorption isotherms of CH4 in ZIF-8 at (left) 125 K and (right) 300 K. Experiments = black circles. (a) UFF simulations on ZIF-8AP = diamonds; (b) UFF(*) simulations on ZIF-8AP = squares and (c) UFF(+) on ZIF-8AP = closed triangles and on ZIF-8HP = open triangles. |
The match between the maximum adsorption capacity in the experimental and UFF-simulated adsorption isotherms at 125 K suggests that the accessible pore volume is correctly described by the molecular simulation. However, for all temperatures the simulated Henry's constants are much higher than the experimental values, indicating that the solid–fluid interactions are over-predicted (Table 2). Moreover, the Qst values, directly related to the interaction energy, are overestimated by around 20% (Fig. 3a). To take this into account, we considered two alternatives: first, we used an adjusted UFF potential, named here as UFF(*), where σ and ε were adjusted in order to achieve a good fit over the whole pressure range of the isotherm, following a similar approach used, for example, by Pérez-Pellitero et al.10 Second, we used a modified UFF potential named UFF(+), where only ε was adjusted in order to achieve a good fit in the low pressure range of the isotherm (i.e. to correctly describe the Henry's law region, which is a direct measure of the strength of the solid–fluid interactions) rather than the adsorption capacity. Moreover, for the second case we conducted the simulations in two different structural configurations (i.e. ZIF-8AP and ZIF-8HP) to study the role of the framework flexibility (i.e. the swing of the imidazolate ring) previously observed for the adsorption of N2, following a similar approach that we used in the study of the adsorption processes in flexible ZIF and MOF structures.18,43,44
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Fig. 3 Comparison between the experimental (black circles) and simulated isosteric heat of adsorption, Qst, for (a) methane and (b) CO2 adsorption in ZIF-8. UFF on ZIF-8AP (blue diamonds); UFF(*) on ZIF-8AP (green squares) and UFF(+) on ZIF-8AP (closed red triangles) and on ZIF-8HP (open red triangles). |
Temperature (K) | Exp (mmol g−1 bar−1) | ZIF-AP | ZIF-8HP | |||
---|---|---|---|---|---|---|
UFF | UFF(*) | UFF(+) | UFF(+) | |||
CH4 | 125 | N/A | 3727 | 255 | 320 | 320 |
150 | 61.8 | 293.3 | 38.4 | 45.4 | 39.7 | |
200 | 3.59 | 12.92 | 3.22 | 3.47 | 2.89 | |
240 | 0.97 | 4.07 | 0.91 | 0.97 | 0.82 | |
270 | 0.48 | 1.88 | 0.46 | 0.49 | 0.41 | |
300 | 0.28 | 0.95 | 0.27 | 0.29 | 0.24 | |
CO2 | 300 | 0.58 | 1.79 | 0.29 | 0.56 | 0.44 |
C2H6 | 273 | 3.51 | 30.6 | 1.64 | 3.61 | 2.36 |
C3H8 | 273 | 22.6 | 185.4 | 4.75 | 25.1 | 13.2 |
C4H10 | 273 | 189.2 | — | 33.3 | 193 | 76.3 |
CH4 (ZIF-20) | 273 | 1.10 | 8.85 | 1.18 | 1.14 | — |
Using UFF(*), for which both Lennard-Jones parameters, σ and ε, were adjusted, leads to an excellent agreement with the experimental adsorption isotherms for all temperatures studied (Fig. 2b and S4†) and a significant reduction of the Henry's constants and isosteric heat of adsorption (Table 2 and Fig. 3a). On the other hand, when using UFF(+), for which only the Lennard-Jones parameter ε was adjusted, the ZIF-8AP configuration results were in excellent agreement with the experimental isotherms at loadings below 30 molecules per unit cell (Fig. 2c and S5†) as well as the Henry's constants and isosteric heat of adsorption (Table 2 and Fig. 3a). This indicates that UFF(+) provides a good description of the fluid–solid interactions. However, for higher loadings (i.e. above 30 molec uc−1), the simulations start diverging from the experimental behavior. This is particularly pronounced for 125 K, where the simulated isotherm reaches a plateau around 33 molec uc−1 whereas the experimental isotherm increases up to 37 molec uc−1. Previously, we have shown for the N2 adsorption in ZIF-8 that the structure switches from the ZIF-8AP to the ZIF-8HP configuration at higher loadings.18 Similarly, excellent agreement between the simulated and experimental CH4 isotherms at higher loadings is achieved when using the ZIF-8HP configuration. The same is observed for all the temperatures studied although at higher temperatures there is very little difference in the uptake in the two configurations. This observation is a strong indication that the structural change is not only induced by the N2 molecules but also by other fluids.
The need to reduce the Lennard-Jones parameter, ε, to correctly describe the experimental isotherms for ZIFs is not unique to UFF but also applies in the use of the Dreiding force field13 and a combination of the Dreiding and OPLS force fields proposed by Zhou et al.8,45 (Fig. S6, ESI†). These force fields also show significant deviations to the experimental values when used at lower temperatures, where the adsorption isotherm is more sensitive to the force field parameters.
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Fig. 4 Adsorption isotherms of CO2 in ZIF-8 at (left) 196 K and (right) 273 K. Experiments = black circles. (a) UFF simulations on ZIF-8AP (diamonds); (b) UFF(*) simulations on ZIF-8AP (squares) and (c) UFF(+) on ZIF-8AP (closed triangles); and UFF(+) on ZIF-8HP (open triangles). Note the use of a semi-logarithmic scale at 273 K. |
The transferability of the force fields was also studied for the adsorption of ethane, propane and butane. Fig. 5 shows the comparison between the experimental and simulated isotherms, using UFF(*) and UFF(+) for these gases at 273 K. For UFF, the Henry's constant and amount adsorbed is over-predicted for the whole adsorption isotherm, as expected from the results for CH4 and CO2 (Table 2 and Fig. S7†). The differences between the UFF(*)-simulated isotherms and the experimental ones increase in the order ethane, propane and butane (i.e. they are more significant for the longer alkanes which differ more from CH4, the fluid used to adapt the force field). In contrast, the UFF(+) simulations on ZIF-8AP fit both the experimental isotherm in the low pressure range and the Henry's constant very well. However, the prediction of the amount adsorbed deviates from the experimental data when the pressure (and therefore the loading) increases around 60, 5 and 1.5 kPa for ethane, propane and butane, respectively. When running the simulations using UFF(+) on the ZIF-8HP configuration, the simulated isotherms do not fit the experimental ones at low pressure but the maximum capacity and the higher pressure range starting at 100, 20 and 5 kPa for ethane, propane and butane, respectively, are predicted accurately. The good description of the experimental behavior for every fluid when using a combination of simulated isotherms on ZIF-8AP and ZIF-8HP indicates that the material is experiencing the same structural change as was observed during the adsorption of N2 at 77 K.18
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Fig. 5 Adsorption isotherms of (a) ethane, (b) propane and (c) butane in ZIF-8 at 273 K. Experiments = black circles; (left) UFF(*) simulations on ZIF-8AP (grey squares); (right) UFF(+) on ZIF-8AP (grey triangles) and; UFF(+) on ZIF-8HP (open triangles). |
This structural change is in agreement with similar changes reported during the adsorption of alkanes in ZIF-7, where the gate-opening pressure evolves in the order propane < ethane < methane.46–48 The driving force that causes the change upon gas adsorption is most likely the additional interaction the structure receives when adsorbing extra molecules. Temperature, fluid–solid and fluid–fluid interactions also play an important role in the structural change and in the shape of the adsorption isotherm.49–51 Analogous structural and energetic transitions during gas adsorption have been analyzed by Boutin and co-workers52,53 and others.54
In a further step, we studied the transferability of the force field to methane adsorption in ZIF-20.20 ZIF-20, with an LTA topology, presents three different cavities: α-cages, β-cages and small cube pockets with pore apertures of 2.8, 2.0 and 1.5 Å, respectively. As a result, methane molecules could be adsorbed only in the α-cages and the other cavities need to be blocked during the GCMC simulation. Fig. 6 shows the results of the comparison of the experimental isotherms with the simulated isotherms, using UFF and modified UFF(*) and UFF(+) force fields for methane at 273 K. Firstly, using UFF resulted in a significant over-prediction of the Henry's constant and experimental isotherm, whereas UFF(+) was able to accurately predict the experimental results, giving better results than UFF(*) (Table 2).
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Fig. 6 Adsorption isotherms of methane in ZIF-20 at 273 K. Experiments = black circles; UFF simulations = diamonds; UFF(*) simulations = squares and UFF(+) = closed triangles. |
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Fig. 7 Density distributions of CH4 at 125 K and adsorption sites in (left) ZIF-8AP = 15 molec uc−1; (center) ZIF-8AP = 36 molec uc−1 and (right) ZIF-8HP = 40 molec uc−1. Site I = black circle; Site II = red circle and Site IV = green circle. Each purple dot represents the position of a CH4 molecule during the simulation. In total, 150![]() |
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Fig. 8 Most stable adsorption site (configuration α1) for one CH4 in ZIF-8AP, resulting from energy minimizations with DFT calculations with the Grimme dispersion correction. |
α1 | β1 | γ | Θ | |
---|---|---|---|---|
Equivalent GCMC Site | I | II | III | IV |
BE (kJ mol−1) | −21.0 | −17.6 | −2.6 | (PE) −1.1 |
An additional stable configuration is β1, with a BE equal to −17.6 kJ mol−1, obtained for a CH4 molecule at the center of the 6-ring pore-window (Fig. 9). It arises from the strong interactions between the charge on the aromatic CC double bond of the imidazolate ring, as indicated by the short H(CH4)⋯C
C distance of 3.2 Å, which is in very good agreement with the experimental value of 3.21 Å.55 A further stabilising contribution comes from the interaction of CH4 with the electronic charge on the methyl groups, as indicated by the short H(CH4)⋯C(CH3) distance of 3.4 Å. This configuration is related to the channel Site II, as previously described.55 The next stable configuration (configuration γ) has a very weak BE of −2.6 kJ mol−1 and corresponds to a CH4 molecule located at the center of the unit cell, which resembles Site III observed in the previous experiments55 and GCMC calculations. This adsorption site plays an important role only at high uptake, when the adsorption of further molecules is stabilized by CH4–CH4 interactions.
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Fig. 9 Fourth stable adsorption site (configuration β1) for one CH4 in ZIF-8AP, resulting from energy minimizations with DFT calculations with the Grimme dispersion correction. |
In the case of ZIF-8HP, the PE required for positioning one CH4 molecule in the middle of the 4-ring window (Site IV, or Site Θ) is −1.12 kJ mol1. The small value of this penalty energy, assuming a structural change from ZIF-8AP to ZIF-8HP, suggests that the center of the 4-ring window (Fig. 10a) is thermodynamically accessible to CH4. This is consistent with Site IV predicted from the GCMC simulations, which becomes populated at higher loading. The main interaction stabilizing CH4 in this position is between the hydrogens of CH4 and the two nitrogens at opposite imidazolate linkers, with H⋯N distances of about 2.64 Å (Fig. 10b).
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Fig. 10 (a) DFT calculated position of CH4 in the 4-ring window adsorption site (Site Θ or alternatively Site IV) of the ZIF-8HP configuration, resulting from energy minimizations with DFT calculations with the Grimme dispersion correction. (b) Enlarged snapshot of the 4-ring adsorption site. Distances are in Å. |
The results obtained from the DFT-D calculations were found to be consistent with GCMC and experimental observations, illustrating the nature of the CH4 adsorption sites and their related binding energies. They show that the CC double bond of the imidazolate ligand is the most favorable adsorption site, followed by that at the center of the 6-ring pore-window. The difference in binding energy between the two is relatively small, only about 3.0 kJ mol−1. On the other hand, the DFT calculations confirm the existence of a stable location of CH4 in the middle of the 4-ring window of the ZIF-8HP structural configuration, generated by the swing effect of the imidazolate linkers. The calculations show the importance of the N atoms of the imidazolate ring and their favorable role in the interaction with CH4. Our results indicate the role of this site in the structural change of ZIF-8 occurring with increases in the number of adsorbed CH4 species.
Footnotes |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c2dt30774j |
‡ Current address: Department of Chemical and Biological Engineering, Northwestern University, USA. |
This journal is © The Royal Society of Chemistry 2012 |